Chromosome 11

Maximum LOD scores, breakage probability and distance estimates

This table lists: 1) each locus pair, 2) the number of hybrids typed for both loci, 3) number of hybrids typed that are negative for both loci, 4) number of hybrids that are negative for the first locus and positive for the second locus, 5) number of hybrids that are positive for the first locus and negative for the second locus, 6) number of hybrids that are positive for both loci, 7) estimates of the breakage probablility, 8) distance (in Rays) between both loci, and 9) maximum lod scores.

Locus names are abbreviated to the last three or four numbers. For example: SWR3456 is listed as 3456, SWR456 is denoted R456 etc.



                    BOTH                                               LOD
  LOCUS1  LOCUS2    TYPED    --    -+    +-    ++    P(BR)     DIST   SCORE

   1486    1460      112     64     9    17    22     .517     .728    5.00
   1486    1632      116     53    22    20    21     .764    1.442    1.16
   1486    6E09      117     56    19    17    25     .635    1.009    2.89
   1486    0071      115     47    27    24    17     .946    2.916     .06
   1486    W151      110     51    21    27    11    1.000     INF      .00
   1486    1684      115     57    17    28    13     .909    2.399     .17
   1486    1452      116     60    14    31    11     .940    2.806     .08
   1486    W435      117     60    15    30    12     .918    2.506     .14
   1486    1415      116     57    18    22    19     .754    1.401    1.28
   1486    W878      117     53    22    23    19     .824    1.739     .64
   1486    R811      117     42    33    15    27     .813    1.674     .70
   1486    0009      116     60    15    38     3    1.000     INF      .00
   1486    1377      115     56    17    28    14     .894    2.245     .23
   1486    W703      114     60    12    35     7    1.000     INF      .00
   1486    1827      115     54    19    34     8    1.000     INF      .00
   1486    1494      116     49    26    26    15     .979    3.841     .01
   1486    W903      115     55    19    27    14     .908    2.391     .17
   1486    1465      115     55    19    29    12     .968    3.427     .02
   1486    1135      116     45    29    15    27     .752    1.394    1.25

   1460    1632      112     63    18     9    22     .533     .762    4.66
   1460    6E09      113     64    18    10    21     .557     .813    4.20
   1460    0071      111     53    28    16    14     .895    2.257     .22
   1460    W151      108     57    22    19    10     .931    2.679     .09
   1460    1684      111     63    18    20    10     .879    2.111     .30
   1460    1452      112     65    17    23     7     .974    3.662     .01
   1460    W435      113     62    20    25     6    1.000     INF      .00
   1460    1415      112     61    21    15    15     .757    1.416    1.20
   1460    W878      113     57    25    16    15     .829    1.764     .60
   1460    R811      113     46    36     8    23     .792    1.568     .86
   1460    0009      112     71    10    24     7     .896    2.262     .22
   1460    1377      111     66    14    15    16     .637    1.013    2.69
   1460    W703      110     69    11    22     8     .859    1.958     .40
   1460    1827      111     64    17    21     9     .901    2.313     .20
   1460    1494      112     57    25    15    15     .817    1.699     .68
   1460    W903      111     56    24    22     9    1.000     INF      .00
   1460    1465      111     59    22    21     9     .970    3.495     .02
   1460    1135      112     46    35    13    18     .904    2.345     .18

   1632    6E09      117     60    14    14    29     .486     .666    6.04
   1632    0071      115     54    18    17    26     .619     .965    3.11
   1632    W151      110     56    17    22    15     .809    1.655     .72
   1632    1684      115     56    18    29    12     .953    3.068     .04
   1632    1452      116     59    14    31    12     .922    2.550     .13
   1632    W435      117     56    18    33    10    1.000     INF      .00
   1632    1415      116     53    21    26    16     .892    2.227     .24
   1632    W878      117     52    22    23    20     .814    1.684     .71
   1632    R811      117     39    35    17    26     .885    2.164     .25
   1632    0009      116     63    10    35     8    1.000     INF      .00
   1632    1377      115     57    16    26    16     .823    1.730     .65
   1632    W703      114     58    13    36     7    1.000     INF      .00
   1632    1827      115     54    19    34     8    1.000     INF      .00
   1632    1494      116     49    25    25    17     .925    2.595     .11
   1632    W903      115     50    22    31    12    1.000     INF      .00
   1632    1465      115     50    23    33     9    1.000     INF      .00
   1632    1135      116     43    30    17    26     .807    1.643     .74

   6E09    0071      116     56    18    16    26     .601     .918    3.48
   6E09    W151      111     57    15    22    17     .748    1.379    1.28
   6E09    1684      116     62    11    24    19     .679    1.136    2.20
   6E09    1452      117     63    11    28    15     .787    1.546     .96
   6E09    W435      118     60    14    30    14     .869    2.033     .36
   6E09    1415      117     57    17    23    20     .740    1.346    1.44
   6E09    W878      118     56    18    20    24     .670    1.109    2.36
   6E09    R811      118     43    31    14    30     .744    1.364    1.34
   6E09    0009      117     63    10    36     8    1.000     INF      .00
   6E09    1377      116     61    12    23    20     .668    1.103    2.36
   6E09    W703      115     61    12    34     8    1.000     INF      .00
   6E09    1827      116     58    15    31    12     .936    2.744     .09
   6E09    1494      117     50    24    25    18     .895    2.251     .23
   6E09    W903      116     53    20    29    14     .947    2.947     .06
   6E09    1465      116     55    17    29    15     .890    2.212     .25
   6E09    1135      117     47    26    13    31     .647    1.042    2.64

   0071    W151      109     72     0     5    32     .098     .103   20.90
   0071    1684      114     64     8    20    22     .545     .787    4.49
   0071    1452      116     64     8    26    18     .676    1.127    2.24
   0071    W435      116     61    11    27    17     .748    1.378    1.34
   0071    1415      115     57    14    23    21     .691    1.174    2.02
   0071    W878      116     56    16    20    24     .646    1.039    2.69
   0071    R811      116     44    28    13    31     .684    1.153    2.05
   0071    0009      115     66     5    31    13     .782    1.521    1.00
   0071    1377      114     51    21    32    10    1.000     INF      .00
   0071    W703      113     58    12    35     8    1.000     INF      .00
   0071    1827      114     57    15    30    12     .929    2.649     .10
   0071    1494      115     49    23    24    19     .864    1.992     .37
   0071    W903      115     54    17    27    17     .840    1.831     .53
   0071    1465      114     55    15    27    17     .814    1.680     .71
   0071    1135      115     43    28    17    27     .774    1.485    1.02

   W151    1684      109     68     9    14    18     .515     .723    4.80
   W151    1452      110     69     9    19    13     .672    1.114    2.15
   W151    W435      111     67    12    20    12     .751    1.389    1.25
   W151    1415      110     60    18    17    15     .748    1.378    1.28
   W151    W878      111     59    20    15    17     .717    1.263    1.63
   W151    R811      111     45    34    10    22     .809    1.655     .71
   W151    0009      110     73     5    23     9     .759    1.423    1.14
   W151    1377      109     55    24    24     6    1.000     INF      .00
   W151    W703      108     64    13    24     7     .946    2.925     .06
   W151    1827      109     63    16    20    10     .856    1.938     .41
   W151    1494      110     54    25    16    15     .840    1.830     .51
   W151    W903      109     58    19    19    13     .828    1.761     .58
   W151    1465      109     60    17    19    13     .798    1.599     .81
   W151    1135      110     45    33    13    19     .873    2.060     .31

   1684    1452      115     80     5    10    20     .343     .420    9.36
   1684    W435      116     79     7    10    20     .379     .476    8.43
   1684    1415      115     70    15     9    21     .489     .671    5.72
   1684    W878      116     71    15     4    26     .365     .453    9.38
   1684    R811      116     55    31     2    28     .572     .849    4.02
   1684    0009      115     76     9    21     9     .780    1.513    1.00
   1684    1377      114     65    19    18    12     .816    1.695     .70
   1684    W703      113     74    12    20     7     .867    2.016     .37
   1684    1827      114     73    13    15    13     .664    1.092    2.31
   1684    1494      115     64    22    11    18     .663    1.089    2.40
   1684    W903      114     64    20    18    12     .831    1.776     .59
   1684    1465      114     70    14    14    16     .615     .955    3.10
   1684    1135      115     48    37    11    19     .879    2.113     .29

   1452    W435      117     87     4     2    24     .137     .147   17.65
   1452    1415      116     75    15     5    21     .421     .547    7.41
   1452    W878      117     73    18     3    23     .419     .542    7.67
   1452    R811      117     55    36     2    24     .674    1.119    2.29
   1452    0009      116     82     8    16    10     .661    1.083    2.30
   1452    1377      115     69    20    15    11     .805    1.636     .79
   1452    W703      114     77    14    17     6     .883    2.147     .29
   1452    1827      115     75    16    13    11     .718    1.266    1.63
   1452    1494      116     67    24     7    18     .631     .996    2.93
   1452    W903      115     67    22    14    12     .800    1.608     .84
   1452    1465      115     71    18    12    14     .676    1.126    2.20
   1452    1135      116     53    37     7    19     .813    1.679     .72

   W435    1415      117     75    14     5    23     .386     .487    8.59
   W435    W878      118     73    17     3    25     .385     .487    8.80
   W435    R811      118     53    37     4    24     .716    1.257    1.73
   W435    0009      117     81     9    18     9     .732    1.318    1.47
   W435    1377      116     67    21    17    11     .844    1.861     .51
   W435    W703      115     75    15    20     5     .965    3.356     .03
   W435    1827      116     73    17    16    10     .797    1.592     .87
   W435    1494      117     66    24     9    18     .659    1.075    2.52
   W435    W903      116     66    22    16    12     .825    1.744     .64
   W435    1465      116     70    19    14    13     .736    1.331    1.47
   W435    1135      117     51    38     9    19     .854    1.927     .44

   1415    W878      117     66    14     9    28     .415     .535    8.01
   1415    R811      117     49    31     7    30     .636    1.010    2.84
   1415    0009      116     74     6    25    11     .746    1.370    1.35
   1415    1377      115     58    20    26    11     .957    3.142     .04
   1415    W703      114     66    14    28     6    1.000     INF      .00
   1415    1827      115     65    15    23    12     .828    1.760     .62
   1415    1494      116     58    22    16    20     .713    1.248    1.75
   1415    W903      115     60    19    21    15     .807    1.647     .77
   1415    1465      115     62    17    21    15     .778    1.506    1.03
   1415    1135      116     46    33    13    24     .802    1.621     .79

   W878    R811      118     54    22     3    39     .397     .505    8.75
   W878    0009      117     68     8    31    10     .876    2.087     .33
   W878    1377      116     60    14    24    18     .735    1.329    1.48
   W878    W703      115     63    13    32     7    1.000     INF      .00
   W878    1827      116     62    14    27    13     .850    1.894     .48
   W878    1494      117     55    21    20    21     .745    1.366    1.38
   W878    W903      116     55    20    27    14     .919    2.510     .14
   W878    1465      116     59    16    25    16     .805    1.633     .80
   W878    1135      117     45    30    15    27     .763    1.440    1.15

   R811    0009      117     51     5    48    13    1.000     INF      .00
   R811    1377      116     45    10    39    22     .864    1.999     .37
   R811    W703      115     51     6    44    14     .967    3.401     .02
   R811    1827      116     50     7    39    20     .834    1.796     .56
   R811    1494      117     46    11    29    31     .663    1.089    2.39
   R811    W903      116     44    12    38    22     .881    2.126     .28
   R811    1465      116     48     9    36    23     .793    1.577     .87
   R811    1135      117     35    21    25    36     .754    1.403    1.17

   0009    1377      115     73    25    10     7     .902    2.327     .20
   0009    W703      114     83    16    11     4     .908    2.384     .18
   0009    1827      115     79    19     9     8     .778    1.504    1.00
   0009    1494      116     67    31     8    10     .879    2.109     .31
   0009    W903      115     69    28    13     5    1.000     INF      .00
   0009    1465      115     71    26    12     6     .969    3.483     .02
   0009    1135      116     51    47     9     9    1.000     INF      .00

   1377    W703      113     77     6    16    14     .550     .797    4.09
   1377    1827      114     72    11    15    16     .583     .876    3.62
   1377    1494      115     61    22    12    20     .656    1.066    2.53
   1377    W903      114     64    19    16    15     .737    1.335    1.44
   1377    1465      114     64    18    18    14     .767    1.458    1.12
   1377    1135      115     48    36    12    19     .879    2.113     .29

   W703    1827      113     87     6     2    18     .217     .244   12.54
   W703    1494      114     74    20     1    19     .462     .619    6.19
   W703    W903      113     74    19     7    13     .634    1.006    2.71
   W703    1465      113     76    17     8    12     .637    1.014    2.63
   W703    1135      114     52    43     7    12    1.000     INF      .00

   1827    1494      115     74    14     1    26     .298     .354   11.52
   1827    W903      114     71    16    10    17     .569     .843    3.90
   1827    1465      114     73    14    10    17     .537     .769    4.51
   1827    1135      115     49    40    11    15     .969    3.462     .02

   1494    W903      115     65     8    16    26     .447     .592    6.93
   1494    1465      115     64    10    19    22     .559     .818    4.25
   1494    1135      116     44    31    16    25     .812    1.672     .70

   W903    1465      114     76     5     6    27     .222     .251   14.43
   W903    1135      115     46    35    13    21     .861    1.977     .38

   1465    1135      115     44    39    15    17     .993    4.976     .00




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