Chromosome 12

Maximum LOD scores, breakage probability and distance estimates

This table lists: 1) each locus pair, 2) the number of hybrids typed for both loci, 3) number of hybrids typed that are negative for both loci, 4) number of hybrids that are negative for the first locus and positive for the second locus, 5) number of hybrids that are positive for the first locus and negative for the second locus, 6) number of hybrids that are positive for both loci, 7) estimates of the breakage probablility, 8) distance (in Rays) between both loci, and 9) maximum lod scores.

Locus names are abbreviated to the last three or four numbers. For example: SWR3456 is listed as 3456, SWR456 is denoted R456 etc.



                    BOTH                                               LOD
  LOCUS1  LOCUS2    TYPED    --    -+    +-    ++    P(BR)     DIST   SCORE

   8F12      GH      117     62    10    29    16     .773    1.482    1.10
   8F12    2490      117     61    11    29    16     .787    1.547     .96
   8F12    0143      117     57    15    28    17     .817    1.701     .70
   8F12    2494      114     56    14    26    18     .772    1.477    1.07
   8F12    W957      117     60    12    24    21     .670    1.109    2.35
   8F12    W943      117     65     7    18    27     .452     .602    6.91
   8F12    W874      115     66     5    17    27     .408     .525    8.04
   8F12    1350      116     65     7     9    35     .273     .319   13.28
   8F12    4H11      115     68     3    15    29     .332     .403   10.59
   8F12    SW37      117     65     7     3    42     .161     .175   19.49
   8F12    R390      116     67     4     5    40     .149     .161   19.92
   8F12    W168      115     63     7     3    42     .162     .177   19.11
   8F12    0090      117     57    15    28    17     .817    1.701     .70
   8F12    1956      115     50    21    20    24     .727    1.299    1.54
   8F12    SW62      116     57    15    29    15     .862    1.978     .40
   8F12    W467      116     60    12    26    18     .735    1.329    1.48
   8F12    1962      114     55    15    25    19     .760    1.429    1.18
   8F12    0147      117     60    12    25    20     .695    1.188    2.00
   8F12    WC23      115     65     5    26    19     .621     .970    3.07
   8F12    0106      117     69     3    30    15     .700    1.205    1.92
   8F12    1936      115     67     5    32    11     .833    1.791     .58
   8F12    1021      116     65     7    38     6    1.000     INF      .00

     GH    2490      118     75    17    16    10     .793    1.573     .92
     GH    0143      118     71    21    15    11     .812    1.672     .76
     GH    2494      115     68    21    15    11     .819    1.711     .68
     GH    W957      118     81    11     4    22     .323     .390   10.40
     GH    W943      118     74    18    10    16     .608     .937    3.31
     GH    W874      116     70    20    14    12     .769    1.465    1.12
     GH    1350      117     63    28    12    14     .816    1.695     .72
     GH    4H11      116     69    21    15    11     .817    1.697     .71
     GH    SW37      118     58    34    11    15     .869    2.030     .37
     GH    R390      117     63    29    10    15     .787    1.546     .96
     GH    W168      116     56    34    11    15     .876    2.088     .32
     GH    0090      118     70    22    16    10     .860    1.967     .42
     GH    1956      116     60    30    11    15     .819    1.707     .69
     GH    SW62      117     72    20    15    10     .822    1.727     .67
     GH    W467      117     71    20    16    10     .836    1.806     .57
     GH    1962      115     66    23    15    11     .847    1.878     .49
     GH    0147      118     69    23    17     9     .909    2.392     .18
     GH    WC23      116     78    13    14    11     .686    1.158    2.03
     GH    0106      118     84     8    16    10     .659    1.075    2.36
     GH    1936      116     84     7    16     9     .671    1.111    2.14
     GH    1021      117     84     7    20     6     .824    1.738     .64

   2490    0143      118     81    10     5    22     .323     .390   10.40
   2490    2494      115     77    11     6    21     .370     .463    8.72
   2490    W957      118     71    20    14    13     .746    1.370    1.38
   2490    W943      118     68    23    16    11     .853    1.916     .47
   2490    W874      116     66    23    18     9     .927    2.617     .11
   2490    1350      117     63    27    12    15     .787    1.546     .96
   2490    4H11      116     68    21    16    11     .831    1.776     .61
   2490    SW37      118     60    31     9    18     .759    1.421    1.25
   2490    R390      117     63    27    10    17     .730    1.311    1.55
   2490    W168      116     59    31     8    18     .750    1.387    1.32
   2490    0090      118     68    23    18     9     .921    2.543     .13
   2490    1956      116     57    32    14    13     .920    2.520     .13
   2490    SW62      117     67    24    20     6    1.000     INF      .00
   2490    W467      117     68    22    19     8     .947    2.946     .06
   2490    1962      115     62    26    19     8    1.000     INF      .00
   2490    0147      118     67    24    19     8     .970    3.495     .02
   2490    WC23      116     74    15    18     9     .820    1.716     .68
   2490    0106      118     81    10    19     8     .787    1.548     .94
   2490    1936      116     83     8    17     8     .731    1.313    1.45
   2490    1021      117     81    10    23     3    1.000     INF      .00

   0143    2494      115     82     1     1    31     .040     .041   25.25
   0143    W957      118     68    18    17    15     .727    1.299    1.60
   0143    W943      118     65    21    19    13     .830    1.771     .62
   0143    W874      116     63    22    21    10     .932    2.688     .10
   0143    1350      117     60    25    15    17     .774    1.487    1.08
   0143    4H11      116     64    21    20    11     .885    2.166     .28
   0143    SW37      118     55    31    14    18     .831    1.779     .60
   0143    R390      117     57    28    16    16     .845    1.862     .51
   0143    W168      116     55    30    12    19     .783    1.530     .98
   0143    0090      118     63    23    23     9     .985    4.202     .00
   0143    1956      116     54    31    17    14     .933    2.705     .09
   0143    SW62      117     64    22    23     8     .998    6.051     .00
   0143    W467      117     64    21    23     9     .963    3.290     .03
   0143    1962      115     59    24    22    10     .975    3.706     .01
   0143    0147      118     63    23    23     9     .985    4.202     .00
   0143    WC23      116     70    15    22     9     .874    2.074     .34
   0143    0106      118     75    11    25     7     .909    2.393     .18
   0143    1936      116     79     6    21    10     .709    1.234    1.73
   0143    1021      117     77     8    27     5     .961    3.243     .03

   2494    W957      115     66    17    16    16     .690    1.171    2.03
   2494    W943      115     62    21    20    12     .870    2.039     .35
   2494    W874      113     62    21    20    10     .914    2.459     .15
   2494    1350      114     59    23    14    18     .726    1.296    1.56
   2494    4H11      113     62    20    19    12     .848    1.883     .48
   2494    SW37      115     55    28    13    19     .772    1.479    1.08
   2494    R390      114     56    26    15    17     .799    1.603     .83
   2494    W168      113     55    27    11    20     .723    1.283    1.58
   2494    0090      115     61    22    24     8    1.000     INF      .00
   2494    1956      113     53    29    18    13     .946    2.920     .06
   2494    SW62      114     61    22    24     7    1.000     INF      .00
   2494    W467      114     62    20    23     9     .959    3.203     .03
   2494    1962      114     59    23    22    10     .966    3.370     .02
   2494    0147      115     63    20    22    10     .922    2.548     .13
   2494    WC23      113     69    13    21    10     .817    1.699     .69
   2494    0106      115     73    10    24     8     .862    1.978     .40
   2494    1936      113     76     6    21    10     .713    1.250    1.64
   2494    1021      114     74     8    27     5     .967    3.420     .02

   W957    W943      118     71    14    13    20     .542     .781    4.64
   W957    W874      116     69    16    15    16     .658    1.072    2.49
   W957    1350      117     62    22    13    20     .665    1.095    2.42
   W957    4H11      116     66    18    18    14     .762    1.436    1.19
   W957    SW37      118     56    29    13    20     .766    1.452    1.17
   W957    R390      117     60    25    13    19     .721    1.276    1.67
   W957    W168      116     55    28    12    21     .733    1.321    1.50
   W957    0090      118     62    23    24     9     .998    6.097     .00
   W957    1956      116     55    29    16    16     .863    1.987     .39
   W957    SW62      117     63    22    24     8    1.000     INF      .00
   W957    W467      117     64    20    23    10     .929    2.643     .11
   W957    1962      115     59    23    22    11     .943    2.867     .07
   W957    0147      118     62    23    24     9     .998    6.097     .00
   W957    WC23      116     75    10    17    14     .628     .988    2.90
   W957    0106      118     79     6    21    12     .662    1.084    2.39
   W957    1936      116     78     7    22     9     .764    1.442    1.15
   W957    1021      117     78     7    26     6     .903    2.336     .20

   W943    W874      116     78     4     6    28     .198     .221   15.78
   W943    1350      117     67    17     8    25     .467     .628    6.49
   W943    4H11      116     71    12    13    20     .514     .721    5.17
   W943    SW37      118     63    21     6    28     .475     .644    6.38
   W943    R390      117     67    17     6    27     .421     .546    7.79
   W943    W168      116     61    21     6    28     .479     .652    6.17
   W943    0090      118     66    18    20    14     .786    1.539     .99
   W943    1956      116     59    24    12    21     .673    1.117    2.29
   W943    SW62      117     70    14    17    16     .656    1.066    2.54
   W943    W467      117     71    13    16    17     .611     .945    3.25
   W943    1962      115     66    16    15    18     .633    1.002    2.87
   W943    0147      118     68    16    18    16     .698    1.197    1.97
   W943    WC23      116     75     7    17    17     .534     .763    4.63
   W943    0106      118     80     4    20    14     .577     .860    3.76
   W943    1936      116     78     5    22    11     .686    1.158    2.03
   W943    1021      117     78     6    26     7     .859    1.961     .42

   W874    1350      115     72    12     3    28     .287     .338   12.13
   W874    4H11      114     74     9     9    22     .380     .478    8.49
   W874    SW37      116     65    19     3    29     .395     .502    8.59
   W874    R390      115     69    15     3    28     .337     .411   10.34
   W874    W168      114     64    18     3    29     .382     .481    8.85
   W874    0090      116     65    19    19    13     .807    1.647     .78
   W874    1956      114     57    26    13    18     .757    1.413    1.23
   W874    SW62      115     67    17    18    13     .767    1.457    1.13
   W874    W467      115     69    15    16    15     .675    1.123    2.22
   W874    1962      113     64    18    15    16     .695    1.187    1.93
   W874    0147      116     67    17    18    14     .748    1.377    1.34
   W874    WC23      115     74     9    18    14     .629     .992    2.85
   W874    0106      116     78     6    21    11     .686    1.158    2.03
   W874    1936      114     76     7    23     8     .808    1.652     .75
   W874    1021      115     79     5    23     8     .778    1.504    1.00

   1350    4H11      115     75     0     8    32     .150     .162   18.71
   1350    SW37      117     66     9     3    39     .198     .220   17.21
   1350    R390      116     68     6     5    37     .187     .207   17.50
   1350    W168      115     65     8     2    40     .165     .181   18.79
   1350    0090      117     58    17    27    15     .858    1.952     .42
   1350    1956      115     51    23    19    22     .759    1.422    1.20
   1350    SW62      116     58    17    28    13     .906    2.359     .19
   1350    W467      116     61    14    25    16     .776    1.495    1.06
   1350    1962      114     56    17    24    17     .799    1.603     .83
   1350    0147      117     61    14    24    18     .732    1.318    1.53
   1350    WC23      115     67     7    25    16     .675    1.124    2.23
   1350    0106      117     70     5    29    13     .748    1.379    1.35
   1350    1936      115     69     6    30    10     .840    1.835     .53
   1350    1021      116     68     7    35     6    1.000     INF      .00

   4H11    SW37      116     68    16     1    31     .304     .363   11.79
   4H11    R390      115     70    13     2    30     .277     .324   12.68
   4H11    W168      114     66    16     1    31     .307     .366   11.53
   4H11    0090      116     65    19    19    13     .807    1.647     .78
   4H11    1956      115     54    29    16    16     .867    2.016     .36
   4H11    SW62      115     66    18    19    12     .814    1.681     .72
   4H11    W467      115     68    16    17    14     .721    1.276    1.63
   4H11    1962      113     62    19    17    15     .755    1.404    1.24
   4H11    0147      116     67    17    17    15     .717    1.263    1.69
   4H11    WC23      114     70    12    21    11     .779    1.509    1.01
   4H11    0106      116     76     8    22    10     .754    1.401    1.26
   4H11    1936      114     74     9    24     7     .878    2.106     .31
   4H11    1021      115     75     9    27     4    1.000     INF      .00

   SW37    R390      117     68     0     5    44     .080     .083   25.22
   SW37    W168      116     66     1     1    48     .031     .032   29.93
   SW37    0090      118     54    15    32    17     .872    2.054     .34
   SW37    1956      116     48    20    23    25     .748    1.377    1.31
   SW37    SW62      117     54    15    33    15     .915    2.468     .15
   SW37    W467      117     58    11    29    19     .750    1.388    1.32
   SW37    1962      115     54    14    27    20     .762    1.434    1.18
   SW37    0147      118     59    10    27    22     .672    1.116    2.34
   SW37    WC23      116     64     3    28    21     .597     .909    3.53
   SW37    0106      118     66     3    34    15     .756    1.410    1.28
   SW37    1936      116     64     5    36    11     .885    2.166     .28
   SW37    1021      117     63     6    41     7    1.000     INF      .00

   R390    W168      115     66     5     0    44     .081     .084   24.81
   R390    0090      117     56    17    29    15     .887    2.176     .27
   R390    1956      115     48    23    23    21     .830    1.770     .58
   R390    SW62      116     57    16    30    13     .920    2.520     .13
   R390    W467      116     61    12    26    17     .748    1.378    1.34
   R390    1962      114     56    15    25    18     .772    1.477    1.07
   R390    0147      117     60    13    25    19     .721    1.276    1.67
   R390    WC23      115     65     6    26    18     .648    1.045    2.63
   R390    0106      117     70     3    29    15     .686    1.157    2.11
   R390    1936      115     68     5    31    11     .819    1.711     .68
   R390    1021      116     68     5    36     7     .975    3.708     .01

   W168    0090      116     52    15    32    17     .880    2.122     .29
   W168    1956      114     46    20    23    25     .757    1.414    1.19
   W168    SW62      115     52    15    33    15     .924    2.576     .12
   W168    W467      115     56    11    29    19     .757    1.415    1.23
   W168    1962      113     51    14    28    20     .785    1.537     .93
   W168    0147      116     56    11    28    21     .718    1.266    1.68
   W168    WC23      114     62     4    28    20     .627     .987    2.95
   W168    0106      116     64     3    34    15     .761    1.431    1.21
   W168    1936      114     63     4    35    12     .845    1.863     .50
   W168    1021      115     61     6    41     7    1.000     INF      .00

   0090    1956      116     66    18     5    27     .423     .549    7.69
   0090    SW62      117     77     9    10    21     .403     .516    7.93
   0090    W467      117     73    13    14    17     .580     .868    3.79
   0090    1962      115     69    15    12    19     .559     .818    4.19
   0090    0147      118     71    15    15    17     .625     .980    3.06
   0090    WC23      116     73    12    19    12     .725    1.292    1.58
   0090    0106      118     79     7    21    11     .698    1.197    1.91
   0090    1936      116     78     7    22     9     .764    1.442    1.15
   0090    1021      117     78     8    26     5     .949    2.979     .06

   1956    SW62      115     69     2    16    28     .337     .411   10.34
   1956    W467      115     64     7    21    23     .534     .763    4.77
   1956    1962      113     64     7    15    27     .411     .530    7.83
   1956    0147      116     64     7    20    25     .500     .693    5.62
   1956    WC23      114     65     6    26    17     .663    1.089    2.38
   1956    0106      116     66     5    32    13     .793    1.576     .90
   1956    1936      114     67     4    31    12     .788    1.550     .93
   1956    1021      115     65     6    37     7    1.000     INF      .00

   SW62    W467      116     80     7     7    22     .307     .366   10.79
   SW62    1962      114     77     7     4    26     .227     .258   14.07
   SW62    0147      117     78     9     8    22     .360     .446    9.25
   SW62    WC23      115     74    12    18    11     .733    1.320    1.47
   SW62    0106      117     79     8    21     9     .762    1.435    1.18
   SW62    1936      115     77     8    23     7     .850    1.894     .47
   SW62    1021      116     79     7    24     6     .880    2.116     .31

   W467    1962      114     80     4     0    30     .081     .084   22.06
   W467    0147      117     83     4     2    28     .123     .132   19.45
   W467    WC23      115     74    11    17    13     .663    1.087    2.35
   W467    0106      117     80     7    19    11     .669    1.105    2.25
   W467    1936      115     79     6    20    10     .695    1.186    1.88
   W467    1021      116     78     8    25     5     .939    2.799     .08

   1962    0147      115     80     1     5    29     .121     .129   19.60
   1962    WC23      113     69    10    21    13     .712    1.246    1.70
   1962    0106      115     74     7    23    11     .733    1.320    1.47
   1962    1936      113     73     6    24    10     .759    1.423    1.18
   1962    1021      114     73     7    28     6     .935    2.726     .09

   0147    WC23      116     75     9    17    15     .595     .905    3.44
   0147    0106      118     80     6    20    12     .646    1.039    2.61
   0147    1936      116     78     6    22    10     .724    1.287    1.56
   0147    1021      117     76     9    28     4    1.000     INF      .00

   WC23    0106      116     92     0     6    18     .167     .183   14.30
   WC23    1936      114     89     3    10    12     .409     .525    6.43
   WC23    1021      115     82    10    20     3     .987    4.378     .00

   0106    1936      116     95     4     5    12     .310     .371    8.45
   0106    1021      117     90    10    14     3     .915    2.465     .15

   1936    1021      116     88    12    15     1    1.000     INF      .00




[Home]