Chromosome 16

Maximum LOD scores, breakage probability and distance estimates

This table lists: 1) each locus pair, 2) the number of hybrids typed for both loci, 3) number of hybrids typed that are negative for both loci, 4) number of hybrids that are negative for the first locus and positive for the second locus, 5) number of hybrids that are positive for the first locus and negative for the second locus, 6) number of hybrids that are positive for both loci, 7) estimates of the breakage probablility, 8) distance (in Rays) between both loci, and 9) maximum lod scores.

Locus names are abbreviated to the last three or four numbers. For example: SWR3456 is listed as 3456, SWR456 is denoted R456 etc.



                    BOTH                                               LOD
  LOCUS1  LOCUS2    TYPED    --    -+    +-    ++    P(BR)     DIST   SCORE

   0111    W813      113     51    12    19    31     .534     .763    4.71
   0111    W742      112     49    14    17    32     .532     .760    4.68
   0111    W469      112     53    10    40     9    1.000     INF      .00
   0111    1035      112     41    22    28    21     .912    2.427     .15
   0111    2411      113     44    19    25    25     .778    1.507     .97
   0111    W419      112     41    21    21    29     .730    1.308    1.43
   0111    W403      111     48    13    27    23     .736    1.330    1.39
   0111    1645      111     43    19    20    29     .683    1.149    1.99
   0111    0298      113     44    19    20    30     .669    1.107    2.22
   0111    0077      113     40    23    21    29     .759    1.423    1.13
   0111    1638      111     44    18    25    24     .778    1.506     .96
   0111    2080      108     42    19    19    28     .685    1.156    1.91
   0111    W557      109     43    19    20    27     .702    1.212    1.72
   0111    1305      111     43    19    20    29     .683    1.149    1.99
   0111    W208      111     44    18    22    27     .710    1.237    1.66
   0111    1341      111     25    37    10    39     .832    1.784     .47
   0111    W977      113     30    33    19    31     .906    2.360     .16
   0111    1454      112     32    31    21    28     .917    2.494     .12
   0111    0026      113     39    24    22    28     .798    1.599     .78
   0111    W262      113     43    20    32    18     .963    3.308     .03
   0111    2480      112     34    29    24    25     .945    2.893     .05
   0111    1897      113     47    16    29    21     .823    1.734     .62
   0111    0105      112     38    25    27    22     .940    2.815     .07
   0111    SW18      107     39    21    33    14    1.000     INF      .00

   W813    W742      117     68     6     1    42     .114     .121   22.53
   W813    W469      117     70     4    28    15     .686    1.157    2.11
   W813    1035      117     52    22    20    23     .743    1.357    1.39
   W813    2411      118     51    23    20    24     .746    1.371    1.36
   W813    W419      117     44    29    21    23     .868    2.026     .35
   W813    W403      116     56    16    22    22     .694    1.183    1.99
   W813    1645      116     45    28    21    22     .864    1.999     .37
   W813    0298      118     48    26    19    25     .770    1.470    1.10
   W813    0077      117     42    31    21    23     .901    2.312     .19
   W813    1638      116     50    23    21    22     .786    1.540     .95
   W813    2080      113     44    26    19    24     .801    1.616     .77
   W813    W557      114     46    25    20    23     .803    1.624     .77
   W813    1305      116     48    24    17    27     .704    1.216    1.83
   W813    W208      116     49    23    20    24     .755    1.405    1.24
   W813    1341      116     27    45     9    35     .922    2.550     .10
   W813    W977      118     34    40    17    27     .964    3.326     .02
   W813    1454      117     39    35    17    26     .885    2.164     .25
   W813    0026      118     46    28    19    25     .802    1.618     .80
   W813    W262      118     52    22    27    17     .901    2.313     .20
   W813    2480      117     35    39    25    18    1.000     INF      .00
   W813    1897      118     52    22    27    17     .901    2.313     .20
   W813    0105      117     44    30    24    19     .963    3.291     .03
   W813    SW18      112     45    24    31    12    1.000     INF      .00

   W742    W469      116     67     2    30    17     .659    1.075    2.48
   W742    1035      116     49    20    23    24     .755    1.405    1.24
   W742    2411      117     51    18    20    28     .646    1.040    2.69
   W742    W419      116     44    24    21    27     .768    1.462    1.08
   W742    W403      115     56    11    22    26     .588     .887    3.68
   W742    1645      115     45    23    21    26     .762    1.437    1.14
   W742    0298      117     47    22    20    28     .710    1.237    1.76
   W742    0077      116     41    27    21    27     .818    1.706     .65
   W742    1638      115     50    19    20    26     .682    1.146    2.11
   W742    2080      112     44    22    19    27     .722    1.280    1.53
   W742    W557      113     46    21    20    26     .723    1.283    1.55
   W742    1305      115     48    19    17    31     .607     .934    3.28
   W742    W208      115     48    19    21    27     .692    1.177    1.97
   W742    1341      115     26    41    10    38     .875    2.080     .27
   W742    W977      117     35    34    15    33     .812    1.673     .67
   W742    1454      116     36    33    19    28     .885    2.163     .25
   W742    0026      117     43    26    21    27     .796    1.589     .84
   W742    W262      117     49    20    29    19     .885    2.161     .27
   W742    2480      116     35    34    24    23    1.000     INF      .00
   W742    1897      117     50    19    29    19     .870    2.037     .35
   W742    0105      116     43    26    25    22     .897    2.273     .21
   W742    SW18      111     43    22    32    14    1.000     INF      .00

   W469    1035      116     61    37    11     7    1.000     INF      .00
   W469    2411      117     58    40    13     6    1.000     INF      .00
   W469    W419      116     55    42    10     9    1.000     INF      .00
   W469    W403      115     66    30    11     8     .953    3.060     .05
   W469    1645      115     55    42    10     8    1.000     INF      .00
   W469    0298      117     58    40     8    11     .976    3.744     .01
   W469    0077      116     54    43     8    11    1.000     INF      .00
   W469    1638      115     62    34     9    10     .935    2.736     .09
   W469    2080      112     53    41    10     8    1.000     INF      .00
   W469    W557      113     57    39     9     8    1.000     INF      .00
   W469    1305      115     56    40     9    10    1.000     INF      .00
   W469    W208      115     58    38    11     8    1.000     INF      .00
   W469    1341      115     29    67     7    12    1.000     INF      .00
   W469    W977      117     41    57    10     9    1.000     INF      .00
   W469    1454      116     45    52    10     9    1.000     INF      .00
   W469    0026      117     54    44    10     9    1.000     INF      .00
   W469    W262      117     67    31    11     8     .960    3.220     .03
   W469    2480      116     50    47     9    10    1.000     INF      .00
   W469    1897      117     64    34    14     5    1.000     INF      .00
   W469    0105      116     56    41    11     8    1.000     INF      .00
   W469    SW18      111     64    29    11     7     .977    3.785     .01

   1035    2411      117     61    11     9    36     .331     .402   11.06
   1035    W419      116     52    19    12    33     .516     .725    5.25
   1035    W403      115     55    15    22    23     .673    1.118    2.26
   1035    1645      116     50    21    16    29     .629     .992    2.95
   1035    0298      117     50    22    17    28     .662    1.085    2.44
   1035    0077      116     44    27    19    26     .790    1.561     .88
   1035    1638      115     49    23    21    22     .790    1.560     .90
   1035    2080      112     46    23    16    27     .688    1.166    1.96
   1035    W557      113     46    23    19    25     .745    1.368    1.30
   1035    1305      115     49    23    15    28     .654    1.062    2.51
   1035    W208      115     43    27    25    20     .934    2.721     .08
   1035    1341      115     24    46    12    33    1.000     INF      .00
   1035    W977      117     37    35    13    32     .796    1.589     .81
   1035    1454      116     40    32    15    29     .793    1.576     .84
   1035    0026      117     46    26    19    26     .769    1.464    1.10
   1035    W262      117     53    19    25    20     .799    1.606     .84
   1035    2480      116     41    31    19    25     .862    1.982     .37
   1035    1897      117     50    22    28    17     .920    2.532     .13
   1035    0105      116     42    29    25    20     .961    3.242     .03
   1035    SW18      111     47    20    29    15     .959    3.184     .03

   2411    W419      117     58    12     7    40     .304     .362   12.19
   2411    W403      116     59    11    19    27     .532     .759    4.89
   2411    1645      116     54    16    12    34     .465     .625    6.57
   2411    0298      118     54    17    13    34     .490     .674    5.98
   2411    0077      117     49    21    14    33     .575     .857    3.95
   2411    1638      116     51    20    20    25     .701    1.206    1.89
   2411    2080      113     48    20    15    30     .603     .924    3.30
   2411    W557      114     48    20    18    28     .658    1.073    2.43
   2411    1305      116     50    21    15    30     .608     .937    3.31
   2411    W208      116     47    22    22    25     .764    1.442    1.14
   2411    1341      116     27    43     9    37     .883    2.148     .24
   2411    W977      118     39    32    12    35     .713    1.249    1.66
   2411    1454      117     39    32    17    29     .822    1.723     .62
   2411    0026      118     42    29    23    24     .889    2.197     .24
   2411    W262      118     50    21    29    18     .905    2.354     .19
   2411    2480      117     40    31    20    26     .868    2.025     .34
   2411    1897      118     50    21    29    18     .905    2.354     .19
   2411    0105      117     43    28    25    21     .931    2.672     .09
   2411    SW18      112     45    21    31    15    1.000     INF      .00

   W419    W403      115     62     3    15    35     .306     .365   11.82
   W419    1645      115     58     6     7    44     .206     .231   16.67
   W419    0298      117     57     8     9    43     .267     .310   13.86
   W419    0077      116     49    15    13    39     .449     .596    6.95
   W419    1638      115     47    17    23    28     .686    1.159    2.04
   W419    2080      112     46    16    17    33     .562     .825    4.04
   W419    W557      113     47    16    19    31     .599     .913    3.37
   W419    1305      115     46    19    19    31     .640    1.021    2.72
   W419    W208      115     47    16    21    31     .623     .976    2.99
   W419    1341      115     22    43    14    36    1.000     INF      .00
   W419    W977      117     31    34    19    33     .889    2.197     .22
   W419    1454      116     33    32    23    28     .941    2.832     .06
   W419    0026      117     37    28    27    25     .942    2.849     .06
   W419    W262      117     46    19    33    19     .931    2.676     .09
   W419    2480      116     36    29    24    27     .906    2.368     .16
   W419    1897      117     47    18    31    21     .867    2.017     .36
   W419    0105      116     42    23    26    25     .845    1.866     .47
   W419    SW18      111     41    20    34    16    1.000     INF      .00

   W403    1645      114     65    11     1    37     .205     .229   16.33
   W403    0298      116     62    16     4    34     .340     .415   10.60
   W403    0077      115     55    22     7    31     .496     .685    5.70
   W403    1638      114     55    22    15    22     .685    1.155    2.08
   W403    2080      111     49    25    13    24     .695    1.189    1.87
   W403    W557      112     52    23    13    24     .659    1.077    2.39
   W403    1305      114     49    27    14    24     .731    1.315    1.47
   W403    W208      114     53    23    14    24     .668    1.104    2.31
   W403    1341      115     28    50     8    29    1.000     INF      .00
   W403    W977      116     34    44    16    22    1.000     INF      .00
   W403    1454      115     37    41    18    19    1.000     INF      .00
   W403    0026      116     47    31    17    21     .856    1.940     .41
   W403    W262      116     53    25    24    14     .947    2.947     .06
   W403    2480      115     38    40    20    17    1.000     INF      .00
   W403    1897      116     57    21    21    17     .806    1.642     .78
   W403    0105      115     49    29    18    19     .864    1.992     .37
   W403    SW18      110     52    21    22    15     .870    2.042     .33

   1645    0298      116     61     5     6    44     .174     .191   18.64
   1645    0077      115     53    12    10    40     .354     .437   10.00
   1645    1638      114     48    17    22    27     .680    1.139    2.12
   1645    2080      111     44    19    18    30     .645    1.035    2.54
   1645    W557      112     46    18    19    29     .645    1.035    2.58
   1645    1305      114     43    23    21    27     .762    1.436    1.12
   1645    W208      114     44    20    24    26     .767    1.459    1.08
   1645    1341      114     24    42    12    36     .948    2.961     .04
   1645    W977      116     31    35    19    31     .918    2.503     .12
   1645    1454      115     33    33    22    27     .952    3.033     .04
   1645    0026      116     39    27    25    25     .896    2.268     .20
   1645    W262      116     45    21    32    18     .962    3.262     .03
   1645    2480      115     34    32    25    24     .999    6.610     .00
   1645    1897      116     48    18    29    21     .841    1.837     .51
   1645    0105      115     44    22    22    27     .757    1.414    1.19
   1645    SW18      110     45    17    31    17     .925    2.592     .11

   0298    0077      117     57     9     6    45     .233     .265   15.53
   0298    1638      116     50    16    21    29     .629     .992    2.95
   0298    2080      113     47    17    16    33     .558     .816    4.16
   0298    W557      114     49    16    17    32     .558     .817    4.20
   0298    1305      116     47    20    18    31     .635    1.009    2.81
   0298    W208      116     49    16    20    31     .603     .925    3.39
   0298    1341      116     25    42    11    38     .909    2.395     .14
   0298    W977      118     33    34    18    33     .861    1.972     .36
   0298    1454      117     35    31    21    30     .873    2.060     .31
   0298    0026      118     41    26    24    27     .840    1.834     .51
   0298    W262      118     46    21    33    18     .966    3.379     .02
   0298    2480      117     36    31    24    26     .938    2.786     .07
   0298    1897      118     51    16    28    23     .769    1.465    1.12
   0298    0105      117     47    20    21    29     .689    1.166    2.04
   0298    SW18      112     46    17    30    19     .878    2.107     .29

   0077    1638      115     49    13    22    31     .591     .894    3.59
   0077    2080      112     43    18    19    32     .633    1.001    2.74
   0077    W557      113     44    17    21    31     .649    1.046    2.52
   0077    1305      115     42    20    22    31     .706    1.225    1.74
   0077    W208      115     45    18    23    29     .698    1.196    1.87
   0077    1341      115     21    42    15    37    1.000     INF      .00
   0077    W977      117     34    29    17    37     .754    1.402    1.16
   0077    1454      116     38    25    18    35     .708    1.230    1.70
   0077    0026      117     42    21    23    31     .729    1.307    1.49
   0077    W262      117     46    17    33    21     .883    2.143     .28
   0077    2480      116     37    26    23    30     .825    1.744     .58
   0077    1897      117     47    16    32    22     .843    1.854     .50
   0077    0105      116     44    19    24    29     .726    1.294    1.53
   0077    SW18      111     45    15    30    21     .833    1.792     .54

   1638    2080      111     52    17    10    32     .470     .635    6.14
   1638    W557      112     53    16    12    31     .488     .670    5.74
   1638    1305      114     51    19    13    31     .546     .791    4.47
   1638    W208      114     49    21    19    25     .709    1.233    1.75
   1638    1341      114     29    41     7    37     .818    1.704     .59
   1638    W977      116     38    33    13    32     .767    1.456    1.06
   1638    1454      115     41    29    14    31     .723    1.285    1.53
   1638    0026      116     48    23    15    30     .640    1.021    2.75
   1638    W262      116     51    20    26    19     .844    1.856     .50
   1638    2480      115     38    33    21    23     .948    2.965     .05
   1638    1897      116     50    21    27    18     .884    2.157     .27
   1638    0105      115     46    25    21    23     .814    1.683     .69
   1638    SW18      110     48    19    26    17     .877    2.094     .29

   2080    W557      111     61     0     3    47     .048     .050   27.05
   2080    1305      111     58     5     4    44     .147     .159   19.50
   2080    W208      111     49    14    16    32     .519     .733    4.93
   2080    1341      111     27    35     5    44     .693    1.181    1.66
   2080    W977      113     32    31    18    32     .845    1.863     .43
   2080    1454      112     36    27    19    30     .798    1.600     .76
   2080    0026      113     41    22    23    27     .785    1.536     .90
   2080    W262      113     49    14    28    22     .767    1.457    1.09
   2080    2480      112     35    28    25    24     .948    2.963     .05
   2080    1897      113     48    15    27    23     .759    1.424    1.17
   2080    0105      112     44    19    22    27     .722    1.280    1.53
   2080    SW18      107     44    16    27    20     .829    1.766     .55

   W557    1305      112     60     6     4    42     .165     .180   18.51
   W557    W208      112     51    15    15    31     .521     .735    4.96
   W557    1341      112     29    36     4    43     .681    1.144    1.85
   W557    W977      114     32    34    18    30     .897    2.274     .19
   W557    1454      113     35    31    19    28     .871    2.046     .31
   W557    0026      114     42    24    22    26     .801    1.614     .77
   W557    W262      114     52    14    26    22     .732    1.315    1.49
   W557    2480      113     35    31    24    23     .982    4.015     .01
   W557    1897      114     51    15    26    22     .747    1.375    1.31
   W557    0105      113     45    21    21    26     .739    1.344    1.36
   W557    SW18      108     47    16    25    20     .791    1.563     .84

   1305    W208      114     51    14    16    33     .506     .705    5.39
   1305    1341      114     28    35     7    44     .709    1.233    1.53
   1305    W977      116     33    32    17    34     .819    1.710     .61
   1305    1454      115     36    29    19    31     .812    1.670     .67
   1305    0026      116     40    25    23    28     .814    1.683     .67
   1305    W262      116     51    14    26    25     .701    1.206    1.89
   1305    2480      115     36    29    23    27     .896    2.259     .20
   1305    1897      116     48    17    29    22     .817    1.697     .68
   1305    0105      115     43    22    25    25     .818    1.702     .66
   1305    SW18      110     45    17    29    19     .873    2.060     .31

   W208    1341      114     28    40     8    38     .820    1.715     .57
   W208    W977      116     34    35    17    30     .880    2.124     .26
   W208    1454      115     36    32    20    27     .896    2.259     .20
   W208    0026      116     44    25    21    26     .790    1.561     .88
   W208    W262      116     51    18    28    19     .844    1.856     .50
   W208    2480      115     40    28    19    28     .803    1.625     .75
   W208    1897      116     53    16    25    22     .739    1.345    1.42
   W208    0105      115     43    26    25    21     .910    2.409     .16
   W208    SW18      110     47    18    28    17     .893    2.233     .22

   1341    W977      116     23    13    28    52     .704    1.217    1.51
   1341    1454      115     23    13    33    46     .797    1.594     .69
   1341    0026      116     24    12    41    39     .913    2.443     .13
   1341    W262      116     25    11    52    28    1.000     INF      .00
   1341    2480      115     16    20    43    36    1.000     INF      .00
   1341    1897      116     27     9    52    28    1.000     INF      .00
   1341    0105      115     24    12    44    35     .979    3.856     .01
   1341    SW18      110     28     4    46    32     .893    2.235     .19

   W977    1454      117     44     6    12    55     .272     .317   13.22
   W977    0026      118     41    10    24    43     .533     .761    4.74
   W977    W262      118     46     5    33    34     .616     .957    3.18
   W977    2480      117     35    16    25    41     .661    1.083    2.28
   W977    1897      118     43     8    36    31     .724    1.287    1.57
   W977    0105      117     34    17    34    32     .851    1.902     .42
   W977    SW18      112     35    14    41    22     .995    5.261     .00

   1454    0026      117     48     8    16    45     .372     .465    9.42
   1454    W262      117     50     6    28    33     .560     .820    4.28
   1454    2480      116     38    18    21    39     .632    1.000    2.75
   1454    1897      117     45    11    33    28     .742    1.354    1.37
   1454    0105      116     40    16    27    33     .712    1.244    1.67
   1454    SW18      111     40    14    36    21     .918    2.502     .12

   0026    W262      118     58     7    21    32     .468     .631    6.59
   0026    2480      117     43    22    17    35     .634    1.004    2.82
   0026    1897      118     54    11    25    28     .612     .947    3.31
   0026    0105      117     44    21    24    28     .758    1.419    1.19
   0026    SW18      112     43    18    33    18     .953    3.057     .04

   W262    2480      117     52    26     8    31     .568     .840    4.12
   W262    1897      118     64    15    15    24     .550     .798    4.56
   W262    0105      117     50    28    18    21     .821    1.718     .66
   W262    SW18      112     52    24    24    12     .981    3.943     .01

   2480    1897      117     48    12    30    27     .715    1.256    1.70
   2480    0105      116     39    20    28    29     .811    1.663     .70
   2480    SW18      111     39    19    36    17    1.000     INF      .00

   1897    0105      117     61    17     7    32     .409     .526    8.28
   1897    SW18      112     50    26    26    10    1.000     INF      .00

   0105    SW18      111     44    20    32    15    1.000     INF      .00



[Home]